List of FLEC laboratory publications since 2001
-2009-
-1- Chaillou S, Daty M, Baraige F, Dudez AM, Anglade P, Jones R, Alpert CA, Champomier-Vergès MC, Zagorec M. 2009. Intraspecies genomic diversity and natural population structure of the meat-borne lactic acid bacterium Lactobacillus sakei. Appl. Environ. Microbiol. 75: 970-980.
-2008-
-1- Binesse J, Delsert C, Saulnier D, Champomier-Vergès MC, Zagorec M, Munier-Lehmann H, Mazel D, Le Roux F. 2008. Metalloprotease vsm is the major determinant of toxicity for extracellular products of Vibrio splendidus. Appl. Environ. Microbiol. 74: 7108-7117.
-2- Crutz-Le Coq AM, Zagorec M. 2008. Vectors for Lactobacilli and other Gram-positive bacteria based on the minimal replicon of pRV500 from Lactobacillus sakei. Plasmid. 60:212-220.
-3- Jones RJ, Hussein HM, Zagorec M, Brightwell G, Tagg JR. 2008. Isolation of lactic acid bacteria with inhibitory activity against pathogens and spoilage organisms associated with fresh meat. Food Microbiol. 25: 228-234.
-4- Ammor MS, Gueimonde M, Danielsen M, Zagorec M, van Hoek AH, de Los Reyes-Gavilán CG, Mayo B, Margolles A. 2008. Two different tetracycline resistance mechanisms, plasmid-carried tet(L) and chromosomally located transposon-associated tet(M), coexist in Lactobacillus sakei Rits 9. Appl. Environ. Microbiol. 74: 1394-1401.
-5- Najjari A, Ouzari H, Boudabous A, Zagorec M. 2008. Method for reliable isolation of Lactobacillus sakei strains originating from Tunisian seafood and meat products. Int. J. Food Microbiol. 121: 342-351.
-6- Sánchez B, Champomier-Vergès MC, Anglade P, Baraige F, de Los Reyes-Gavilán CG, Margolles A, Zagorec M. 2008. A preliminary analysis of Bifidobacterium longum exported proteins by two-dimensional electrophoresis. J. Mol. Microbiol. Biotechnol. 14: 74-79.
-2007-
-1- Sánchez B, Champomier-Vergès MC, Stuer-Lauridsen B, Ruas-Madiedo P, Anglade P, Baraige F, de los Reyes-Gavilán CG, Johansen E, Zagorec M, Margolles A. 2007. Adaptation and response of Bifidobacterium animalis subsp. lactis to bile: a proteomic and physiological approach. Appl. Environ. Microbiol. 73: 6757-6767.
-2- Sánchez B, Champomier-Vergès MC, Collado Mdel C, Anglade P, Baraige F, Sanz Y, de los Reyes-Gavilán CG, Margolles A, Zagorec M. 2007. Low-pH adaptation and the acid tolerance response of Bifidobacterium longum biotype longum. Appl. Environ. Microbiol. 73: 6450-6459.
-3- Jofré A, Champomier-Vergès M, Anglade P, Baraige F, Martín B, Garriga M, Zagorec M, Aymerich T. 2007. Protein synthesis in lactic acid and pathogenic bacteria during recovery from a high pressure treatment. Res. Microbiol. 158: 512-520.
-4- Hüfner E, Markieton T, Chaillou S, Crutz-Le Coq AM, Zagorec M, Hertel C. 2007. Identification of Lactobacillus sakei genes induced during meat fermentation and their role in survival and growth. Appl. Environ. Microbiol. 73: 2522-2531.
-2006-
-1- Bryson K, Loux V, Bossy R, Nicolas P, Chaillou S, van de Guchte M, Penaud S, Maguin E, Hoebeke M, Bessières P, Gibrat JF. 2006. AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system. Nucleic Acids Res. 34: 3533-3545.
-2- Ouzari H, Hassen A, Najjari A, Ettoumi B, Daffonchio D, Zagorec M, Boudabous A, Mora D. 2006. A novel phenotype based on esterase electrophoretic polymorphism for the differentiation of Lactococcus lactis ssp. lactis and cremoris. Lett. Appl. Microbiol. 43: 351-359.
-2005-
-1- S. Chaillou, M.C. Champomier-Vergès, M. Cornet, A.M. Crutz le Coq, A.M. Dudez, V. Martin, S. Beaufils, E. Darbon-Rongère, R. Bossy, V. Loux & M. Zagorec. 2005. The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K. Nature Biotechnol. 23: 1527-1533
-2- T. Moretro, K. Naterstad, E. Wang, I.M. Aasen, S. Chaillou, M. Zagorec & L. Axelsson. 2005. Sakacin P non-producing Lactobacillus sakei strains contain homologs of the Sakacin P gene cluster. Res. Microbiol. 153: 949-960.
-3- S. Ammor, E. Dufour, M. Zagorec, S. Chaillou & I. Chevallier. Characterization and selection of Lactobacillus sakei strains isolated from traditional dry-sausage. Food Microbiol. 22: 529-538.
-4- P. Goffin, M. Deghorain, J.L. Mainardi, I. Tytgat, M.C. Champomier-Vergès, M. Kleerebezem & P. Hols. 2005. Lactate racemization is a rescue pathway for supplying D-lactate to the cell wall biosynthesis machinery in Lactobacillus plantarum. J. Bacteriol. 187: 6750-6761.
-5- B. Sanchez, M.C. Champomier-Vergès, P. Anglade, F. Baraige, C. de los Reyes-Gavilan A. Margolles & M. Zagorec. 2005. Proteomic analysis of global changes in protein expression during Bile salt exposure of Bifidobacterium longum NCIMB 8809. J. Bacteriol. 187: 5799-5808.
-6- S. Ammor, C. Rachman, S. Chaillou, H. Prévost, X. Dousset, M. Zagorec, E. Dufour & I. Chevallier.2005. Phenotypic and genotypic identification of lactic acid bacteria isolated from a small-scale facility producing traditional dry sausage. Food Microbiol. 22:373-382.
-2004-
-1- G. Meurice, D. Jacob, C. Deborde, S. Chaillou, A. Rouault, P. Leverrier, G. Jan, A. Thierry, M.-B. Maillard, P. Amet, M. Lalande, M. Zagorec, P. Boyaval & D. Dimova. 2004. Whole genome sequencing project of a dairy Propionibacterium freudenreichii subsp.shermanii genome: progress and first bioinformatic analysis. Le Lait 84:15-24.
-2- A. Marceau, M. Zagorec, S. Chaillou, T. Méra & M. Champomier-Vergès. 2004. Evidence for involvement of at least six proteins in adaptation of Lactobacillus sakei to cold temperature and addition of NaCl. Appl. Environ. Microbiol. 70: 7260-7268.
-2003-
-1- A. Marceau, M. Zagorec & M. Champomier-Vergès. 2003. Positive effects of growth at suboptimal temperature and high salt concentration on long-term survival of Lactobacillus sakei. Res. Microbiol. 154: 37-42.
-2- C.A. Alpert, A.-M. Crutz-Le Coq, C. Malleret & M. Zagorec. 2003. Characterization of a theta-type plasmid from Lactobacillus sakei: a potential basis for low-copy-number vectors in lactobacilli. Appl. Environ. Microbiol. 69: 5574-5584.
-3- P. H. Pouwels & S. Chaillou. 2003. Gene expression in Lactobacilli. In Genetics of lactic acid bacteria: Vol 3. pp. 143-188. B.J.B. Wood & P.J. Warner Eds. Kluwer academic/Plenum publishers, New York.
-4- M. Zagorec. 2003. Lactobacillus sakei and meat products: benefits of an integrative biology approach. Proceedings of International Symposium on �Application of Microbial Genomic Resources�. pp18-24. Institute of Biotechnology, Yeungnam University, South Korea.
-2002-
-1- A.M. Dudez, S. Chaillou, L. Hissler, R. Stentz, M. Champomier-Vergès, C.A. Alpert & M. Zagorec. 2002. Physical and genetic map of the Lactobacillus sakei 23K chromosome. Microbiology. 148: 421-431.
-2- S. Chaillou, A.-M. Dudez & M. Zagorec. 2002. Genome analysis of Lactobacillus sakei 23K: toward new biological and genetic studies of the species. Sciences des Aliments 22: 55-58.
-3- A. Marceau, M. Zagorec & M. Champomier-Vergès. 2002. Analysis of Lactobacillus sakei adaptation to its environment by a proteomic approach. Sciences des Aliments 22: 97-105.
-4- M. Champomier-Vergès, S. Chaillou, M. Cornet & M. Zagorec. 2002. Lactobacillus sakei: recent development and future prospects. Res. Microbiol. 153: 115-123.
-5- M. Champomier-Vergès, E. Maguin, M.Y. Mistou, P. Anglade & J.F. Chich. 2002. Lactic acid bacteria and proteomics: current knowledge and perspectives. J. Chromatography 771 : 329-342.
-6- M. Champomier-Vergès, A. Marceau, T. Méra & M. Zagorec. 2002. The pepR gene of Lactobacillus sakei is positively regulated by anaerobiosis at the transcriptional level. Appl. Environ. Microbiol. 68 : 3873-3877.
-7- T. Kaenhammer, E. Altermann, F. Arigoni, A. Bolotin, F. Breidt, J. Broadbent, R. Cano, S. Chaillou, J. Deutscher, M. Gasson, M. van de Guchte, J. Guzzo, T. Hawkins, P. Hols, R. Hutkins, M. Kleerebezem, J. Kok, O. Kuipers, M. Lubbers, E. Maguin, L. McKay, D. Mills, A. Nauta, R. Overbeek, H. Pel, D. Pridmore, M. Saier, D. van Sinderen, A. Sorokin, J. Steele, D. O�Sullivan, W. de Vos, B. Weimer, M. Zagorec & R. Siezen. 2002. Discovering lactic acid bacteria by genomics. Antonie van Leuwenhoek. 82: 29-58.
-8- M. Champomier-Vergès & M. Zagorec. 2002. Lactic acid bacteria: new taxonomy and classification. In Bacteria, Yeasts and Moulds in Malting and Brewing. Proceedings of the 10th J. de Clerk chair, Leuven (B).
-2001-
-1- R. Stentz, M. Cornet, S. Chaillou & M. Zagorec. 2001. Adaptation of Lactobacillus sakei to meat: a new regulatory mechanism of ribose utilization? Le Lait 81:131-138.
-2- L. Gory, M. C. Montel & M. Zagorec. 2001. Use of green fluorescent protein to monitor Lactobacillus sakei in fermented meat products. FEMS Microbiol. Lett. 194:127-133.
-3- S. Chaillou, M. Champomier-Vergès & M. Zagorec. 2001. Outils génomiques pour Lactobacillus sakei et son utilisation dans l'industrie des produits carnés. in Les outils biologiques dans les procédés et les techniques d'analyse, Ed. Tec & Doc, Paris, pp 291-295.
-4- A. Marceau, T. Méra, M. Zagorec & M. Champomier-Vergès. 2001. Protein expression under uracil privation in Lactobacillus sakei. FEMS Microbiol. Lett. 200: 49-52.